Paper

2024

• Kalantari A, Hambrock C, Grefkes C, Fink GR, Aswendt M. Proportional recovery in mice with cortical stroke
  bioRxiv 2024.10.11.614428.

• Kalantari A, Shahbazi M, Schneider, M, Raikes AC, Frazão VV, Bhattrai A, Carnevale L, Diao Y, Franx BA, and Gammaraccio F,Goncalves L, Lee S, van Leeuwen EM, Michalek A, Mueller S, Olvera AR, Padro D, Selim MK, van der Toorn A, Varriano F, Vrooman R, Wenk P, Albers HE, Boehm-Sturm P, Budinger E, Canals S, De Santis S, Brinton RD, Dijkhuizen RM, Eixarch E, Forloni G, Grandjean J, Hekmatyar K, Jacobs RE, Jelescu I, Kurniawan ND, Lembo G, Longo DL, Maria NSS, Micotti E, Muñoz-Moreno E, Ramos-Cabrer P, Reichardt W, Soria G, Ielacqua GD, Aswendt, M. Automated quality control of small animal MR neuroimaging data.
  Imaging Neuroscience 2024; 2 1–23.

• Paß T, Ricke KM, Hofmann P, Chowdhury RS, Nie Y, Chinnery P, Endepols H, Neumaier B, Carvalho A, Rigoux L, Steculorum SM, Prudent J, Riemer T, Aswendt M, Liss B, Brachvogel B, Wiesner RJ. Preserved striatal innervation maintains motor function despite severe loss of nigral dopaminergic neurons.
  Brain 2024 Sep 3;147(9):3189-3203.

2023

• Blaschke SJ, Vlachakis S, Pallast N, Walter HL, Volz LJ, Wiedermann D, Fink GR, Hoehn M, Aswendt M, Schroeter M, Rueger MA. Transcranial Direct Current Stimulation Reverses Stroke-Induced Network Alterations in Mice.
  Stroke 2023 Aug;54(8):2145-2155

• Mahani FSN, Kalantari A, Fink GR, Hoehn M, Aswendt M. A systematic review of the relationship between magnetic resonance imaging based resting-state and structural networks in the rodent brain
  Frontiers in Neuroscience 2023 Jul 24;17:1194630

• Aswendt M, Hoehn M. Functional hyperconnectivity related to brain disease: maladaptive process or element of resilience?
  Neural Regeneration Research 2023 Jul;18(7):1489-1490

• Kalantari A, Szczepanik M, Heunis S, Mönch C, Hanke M, Wachtler T, Aswendt M. How to establish and maintain a multimodal animal research dataset using DataLad.
  Scientific Data 2023 Jun 5;10(1):357

• Tavares AAS, Mezzanotte L, McDougald W, Bernsen MR, Vanhove C, Aswendt M, Ielacqua GD, Gremse F, Moran CM, Warnock G, Kuntner C, Huisman MC. Community Survey Results Show that Standardisation of Preclinical Imaging Techniques Remains a Challenge.
  Molecular Imaging and Biology 2023 Jun;25(3):560-568

• Stokowska A, Aswendt M, Zucha D, Lohmann S, Wieters F, Morán Suarez J, Atkins AL, Li Y, Miteva M, Lewin J, Wiedermann D, Diedenhofen M, Torinsson Naluai Å, Abaffy P, Valihrach L, Kubista M, Hoehn M, Pekny M, Pekna M. Complement C3a treatment accelerates recovery after stroke via modulation of astrocyte reactivity and cortical connectivity.
  The Journal of Clinical Investigation 2023 May 15;133(10):e162253

• Götz J, Wieters F, Fritz VJ, Käsgen O, Kalantari A, Fink GR, Aswendt M. Temporal and Spatial Gene Expression Profile of Stroke Recovery Genes in Mice.
  Genes (Basel) 2023 Feb 9;14(2):454

2022

• Wieters F, Gruhn M, Büschges A, Fink GR, Aswendt M. Terminal H-reflex Measurements in Mice.
  JoVE Journal 2022 Jun 16;(184)

• Scharwächter L, Schmitt FJ, Pallast N, Fink GR, Aswendt M. Network analysis of neuroimaging in mice.
  NeuroImage 2022.119110

• Aswendt M, Wilhelmsson U, Wieters F, Stokowska A, Schmitt FJ, Pallast N, de Pablo Y, Mohammed L, Hoehn M, Pekna M, Pekny M. Reactive astrocytes prevent maladaptive plasticity after ischemic stroke.
  Progress in Neurobiology 2022 Feb;209:102199

2021

• Aswendt M, Green C, Sadler R, Llovera G, Dzikowski L, Heindl S, Gomez de Agüero M, Diedenhofen M, Vogel S, Wieters F, Wiedermann D, Liesz A, Hoehn M. The gut microbiota modulates brain network connectivity under physiological conditions and after acute brain ischemia.
  iScience 2021 Sep 9;24(10):103095

• Glover JC, Aswendt M, Boulland JL, Lojk J, Stamenković S, Andjus P, Fiori F, Hoehn M, Mitrecic D, Pavlin M, Cavalli S, Frati C, Quaini F; EU COST Action 16122 (BIONECA). Correction to: In vivo Cell Tracking Using Non-invasive Imaging of Iron Oxide-Based Particles with Particular Relevance for Stem Cell-Based Treatments of Neurological and Cardiac Disease.
  Molecular Imaging and Biology 2021 Aug;23(4):624

• Wieters F, Aswendt M. Structural integrity and remodeling underlying functional recovery after stroke.
  Neural Regeneration Research 2021 Jul;16(7):1423-1424

• Leuze C, Goubran M, Barakovic M, Aswendt M, Tian Q, Hsueh B, Crow A, Weber EMM, Steinberg GK, Zeineh M, Plowey ED, Daducci A, Innocenti G, Thiran JP, Deisseroth K, McNab JA. Comparison of diffusion MRI and CLARITY fiber orientation estimates in both gray and white matter regions of human and primate brain.
  NeuroImage 2021 Mar;228:117692

• Aswendt M, Pallast N, Wieters F, Baues M, Hoehn M, Fink GR. Lesion Size- and Location-Dependent Recruitment of Contralesional Thalamus and Motor Cortex Facilitates Recovery after Stroke in Mice.
  Translational Stroke Research 2021 Feb;12(1):87-97

• Wieters F, Weiss Lucas C, Gruhn M, Büschges A, Fink GR, Aswendt M. Introduction to spasticity and related mouse models.
  Experimental Neurology 2021 Jan;335:113491

2020

• Glover JC, Aswendt M, Boulland JL, Lojk J, Stamenković S, Andjus P, Fiori F, Hoehn M, Mitrecic D, Pavlin M, Cavalli S, Frati C, Quaini F; EU COST Action 16122 (BIONECA). In vivo Cell Tracking Using Non-invasive Imaging of Iron Oxide-Based Particles with Particular Relevance for Stem Cell-Based Treatments of Neurological and Cardiac Disease.
  Molecular Imaging and Biology 2020 Dec;22(6):1469-1488

• Pallast N, Wieters F, Nill M, Fink GR, Aswendt M. Graph theoretical quantification of white matter reorganization after cortical stroke in mice. Neuroimage.
  NeuroImage 2020 Aug 15;217:116873

• Vogel S, Hoehn M, Aswendt M. In vivo bioluminescence imaging to elucidate stem cell graft differentiation.
  Neural Regeneration Research 2020 Jan;15(1):61-62

2019

• Goubran M, Leuze C, Hsueh B, Aswendt M, Ye L, Tian Q, Cheng MY, Crow A, Steinberg GK, McNab JA, Deisseroth K, Zeineh M. Multimodal image registration and connectivity analysis for integration of connectomic data from microscopy to MRI. Nature Communications 2019 Dec 3;10(1):5504

• Pallast N, Wieters F, Fink GR, Aswendt M. Atlas-based imaging data analysis tool for quantitative mouse brain histology (AIDAhisto).
  Journal of Neuroscience Methods 2019 Oct 1;326:108394

• Pallast N, Diedenhofen M, Blaschke S, Wieters F, Wiedermann D, Hoehn M, Fink GR, Aswendt M. Processing Pipeline for Atlas-Based Imaging Data Analysis of Structural and Functional Mouse Brain MRI (AIDAmri).
  Frontiers in Neuroinformatics 2019 Jun 4;13:42

• Collmann FM, Pijnenburg R, Hamzei-Taj S, Minassian A, Folz-Donahue K, Kukat C, Aswendt M, Hoehn M. Individual in vivo Profiles of Microglia Polarization After Stroke, Represented by the Genes iNOS and Ym1.
  Frontiers in Immunology 2019 Jun 4;10:1236

• Apetz N, Kordys E, Simon M, Mang B, Aswendt M, Wiedermann D, Neumaier B, Drzezga A, Timmermann L, Endepols H. Effects of subthalamic deep brain stimulation on striatal metabolic connectivity in a rat hemiparkinsonian model.
  Disease Models & Mechanisms 2019 May 24;12(5):dmm039065

• Vogel S, Schäfer C, Hess S, Folz-Donahue K, Nelles M, Minassian A, Schwarz MK, Kukat C, Ehrlich M, Zaehres H, Kloppenburg P, Hoehn M, Aswendt M. The in vivo timeline of differentiation of engrafted human neural progenitor cells.
  Stem Cell Research 2019 May;37:101429

• Aswendt M, Vogel S, Schäfer C, Jathoul A, Pule M, Hoehn M. Quantitative in vivo dual-color bioluminescence imaging in the mouse brain.
  Neurophotonics 2019 Apr;6(2):025006

2018

• Ito M, Aswendt M, Lee AG, Ishizaka S, Cao Z, Wang EH, Levy SL, Smerin DL, McNab JA, Zeineh M, Leuze C, Goubran M, Cheng MY, Steinberg GK. RNA-Sequencing Analysis Revealed a Distinct Motor Cortex Transcriptome in Spontaneously Recovered Mice After Stroke.
  Stroke 2018 Sep;49(9):2191-2199

• Vogel S, Aswendt M, Nelles M, Henn N, Schneider G, Hoehn M. Initial graft size and not the innate immune response limit survival of engrafted neural stem cells.
  Tissue Engineering and Regenerative Medicine 2018 Mar;12(3):784-793

• Pallast N, Wieters F, Nill M, Fink GR, Aswendt M. Cloud-based relational database for multimodal animal data.
  Database (Oxford) 2018 Jan 1;2018:bay124

2017

• Aswendt M, Collmann FM, Hoehn M. Neurobiological insights from bioluminescence imaging.
  Oncotarget 2017 Aug 13;8(41):69198-69199

• Leuze C, Aswendt M, Ferenczi E, Liu CW, Hsueh B, Goubran M, Tian Q, Steinberg G, Zeineh MM, Deisseroth K, McNab JA. The separate effects of lipids and proteins on brain MRI contrast revealed through tissue clearing.
  NeuroImage 2017 Aug 1;156:412-422

• Adamczak J, Aswendt M, Kreutzer C, Rotheneichner P, Riou A, Selt M, Beyrau A, Uhlenküken U, Diedenhofen M, Nelles M, Aigner L, Couillard-Despres S, Hoehn M. Neurogenesis upregulation on the healthy hemisphere after stroke enhances compensation for age-dependent decrease of basal neurogenesis.
  Neurobiology of Disease 2017 Mar;99:47-57

• Aswendt M, Schwarz M, Abdelmoula WM, Dijkstra J, Dedeurwaerdere S. Whole-Brain Microscopy Meets In Vivo Neuroimaging: Techniques, Benefits, and Limitations.
  Molecular Imaging and Biology 2017 Feb;19(1):1-9